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BMCBI
2010
83views more  BMCBI 2010»
13 years 5 months ago
Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins
Background: Phylogenies capture the evolutionary ancestry linking extant species. Correlations and similarities among a set of species are mediated by and need to be understood in...
William P. Kelly, Michael P. H. Stumpf
BMCBI
2010
201views more  BMCBI 2010»
13 years 2 months ago
IntelliGO: a new vector-based semantic similarity measure including annotation origin
Background: The Gene Ontology (GO) is a well known controlled vocabulary describing the biological process, molecular function and cellular component aspects of gene annotation. I...
Sidahmed Benabderrahmane, Malika Smaïl-Tabbon...
AOSD
2010
ACM
14 years 3 days ago
Tracking code patterns over multiple software versions with Herodotos
An important element of understanding a software code base is to identify the repetitive patterns of code it contains and how these evolve over time. Some patterns are useful to t...
Nicolas Palix, Julia L. Lawall, Gilles Muller
CLUSTER
2002
IEEE
13 years 10 months ago
Leveraging Standard Core Technologies to Programmatically Build Linux Cluster Appliances
Clusters have made the jump from lab prototypes to fullfledged production computing platforms. The number, variety, and specialized configurations of these machines are increasi...
Mason J. Katz, Philip M. Papadopoulos, Greg Bruno
STACS
2005
Springer
13 years 10 months ago
Sampling Sub-problems of Heterogeneous Max-cut Problems and Approximation Algorithms
Abstract Abstract. Recent work in the analysis of randomized approximation algorithms for NP-hard optimization problems has involved approximating the solution to a problem by the ...
Petros Drineas, Ravi Kannan, Michael W. Mahoney