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    » Characterization of phylogenetic networks with NetTest
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    BMCBI
    2010
    79views more  BMCBI 2010»
    Characterization of phylogenetic networks with NetTest
    13 years 6 months ago
    Characterization of phylogenetic networks with NetTest
    Download  www.biomedcentral.com
    Miguel Arenas, Mateus Patricio, David Posada, Gabr...
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    CSB
    2005
    IEEE
    126views Bioinformatics» more  CSB 2005»
    Visualization of Logic Analysis of Phylogenetic Profiles (LAPP)
    13 years 11 months ago
    Visualization of Logic Analysis of Phylogenetic Profiles (LAPP)
    Download  conferences.computer.org
    Recently Bowers et al. [1] analyzed triplet logic relationships among 4873 Clusters of Orthologous Groups (COGS) from 67 fully sequenced organisms by calculating how well logic re...
    Kay A. Robbins, Li Zhao
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    BMCBI
    2006
    166views more  BMCBI 2006»
    Extraction of phylogenetic network modules from the metabolic network
    13 years 5 months ago
    Extraction of phylogenetic network modules from the metabolic network
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    Background: In bio-systems, genes, proteins and compounds are related to each other, thus forming complex networks. Although each organism has its individual network, some organis...
    Takuji Yamada, Minoru Kanehisa, Susumu Goto
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    BMCBI
    2005
    198views more  BMCBI 2005»
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
    13 years 5 months ago
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
    Download  www.biomedcentral.com
    Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
    Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
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    BMCBI
    2006
    104views more  BMCBI 2006»
    MANET: tracing evolution of protein architecture in metabolic networks
    13 years 5 months ago
    MANET: tracing evolution of protein architecture in metabolic networks
    Download  www.biomedcentral.com
    Background: Cellular metabolism can be characterized by networks of enzymatic reactions and transport processes capable of supporting cellular life. Our aim is to find evolutionar...
    Hee Shin Kim, Jay E. Mittenthal, Gustavo Caetano-A...
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