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BMCBI
2010
145views more  BMCBI 2010»
13 years 5 months ago
Clustering metagenomic sequences with interpolated Markov models
Background: Sequencing of environmental DNA (often called metagenomics) has shown tremendous potential to uncover the vast number of unknown microbes that cannot be cultured and s...
David R. Kelley, Steven L. Salzberg
RECOMB
2010
Springer
13 years 11 months ago
A Novel Abundance-Based Algorithm for Binning Metagenomic Sequences Using l-Tuples
Abstract. Metagenomics is the study of microbial communities sampled directly from their natural environment, without prior culturing. Among the computational tools recently develo...
Yu-Wei Wu, Yuzhen Ye
BIOINFORMATICS
2010
127views more  BIOINFORMATICS 2010»
13 years 5 months ago
Analyzing taxonomic classification using extensible Markov models
Motivation: As next generation sequencing is rapidly adding new genomes, their correct placement in the taxonomy needs verification. However, the current methods for confirming cl...
Rao M. Kotamarti, Michael Hahsler, Douglas Raiford...
ICDM
2005
IEEE
189views Data Mining» more  ICDM 2005»
13 years 10 months ago
Integrating Hidden Markov Models and Spectral Analysis for Sensory Time Series Clustering
We present a novel approach for clustering sequences of multi-dimensional trajectory data obtained from a sensor network. The sensory time-series data present new challenges to da...
Jie Yin, Qiang Yang
TASLP
2010
102views more  TASLP 2010»
13 years 3 months ago
Representing Musical Sounds With an Interpolating State Model
—A computationally efficient algorithm is proposed for modeling and representing time-varying musical sounds. The aim is to encode individual sounds and not the statistical prop...
Anssi Klapuri, Tuomas Virtanen