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» Clustering of non-polar contacts in proteins
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KDD
2002
ACM
154views Data Mining» more  KDD 2002»
14 years 5 months ago
Mining Protein Contact Maps
The 3D conformation of a protein may be compactly represented in a symmetrical, square, boolean matrix of pairwise, inter-residue contacts, or "contact map". The contact...
Jingjing Hu, Xiaolan Shen, Yu Shao, Chris Bystroff...
ICANNGA
2007
Springer
128views Algorithms» more  ICANNGA 2007»
13 years 11 months ago
A Demonstration of Clustering in Protein Contact Maps for Alpha Helix Pairs
Abstract. The purpose of this work is to demonstrate that it is possible to cluster contact maps for pairs of alpha helices such that each of the clusters corresponds to a group of...
Robert Fraser, Janice I. Glasgow
GCB
1998
Springer
118views Biometrics» more  GCB 1998»
13 years 9 months ago
Clustering of non-polar contacts in proteins
Finn Drabløs
BMCBI
2007
150views more  BMCBI 2007»
13 years 4 months ago
Refining intra-protein contact prediction by graph analysis
Background: Accurate prediction of intra-protein residue contacts from sequence information will allow the prediction of protein structures. Basic predictions of such specific con...
Milana Frenkel-Morgenstern, Rachel Magid, Eran Eya...
BMCBI
2010
132views more  BMCBI 2010»
13 years 5 months ago
Protein docking by Rotation-Based Uniform Sampling (RotBUS) with fast computing of intermolecular contact distance and residue d
Background: Protein-protein interactions are fundamental for the majority of cellular processes and their study is of enormous biotechnological and therapeutic interest. In recent...
Albert Solernou, Juan Fernández-Recio