23 search results - page 2 / 5 » Clustering protein sequences with a novel metric transformed... |
JCB
2007
13 years 5 months ago
2007
We present a novel approach to managing redundancy in sequence databanks such as GenBank. We store clusters of near-identical sequences as a representative union-sequence and a se...
BMCBI
2007
13 years 5 months ago
2007
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
CSB
2003
IEEE
13 years 10 months ago
2003
IEEE
This paper describes a new strategy for designing degenerate primers for a given multiple alignment of amino acid sequences. Degenerate primers are useful for amplifying homologou...
BMCBI
2006
13 years 5 months ago
2006
Background: A structure alignment method based on a local geometric property is presented and its performance is tested in pairwise and multiple structure alignments. In this appr...
BIOINFORMATICS
2011
13 years 15 days ago
2011
Motivation: High-throughput methods for detecting molecular interactions have produced large sets of biological network data with much more yet to come. Analogous to sequence alig...