192 search results - page 1 / 39 » Combinatorics of RNA Secondary Structures |
JCB
2006
13 years 5 months ago
2006
Following Zuker (1986), a saturated secondary structure for a given RNA sequence is a secondary structure such that no base pair can be added without violating the definition of s...
DAM
1998
13 years 5 months ago
1998
CPM
2004
Springer
13 years 11 months ago
2004
Springer
Abstract. This paper addresses the problem of aligning multiple sequences of non-coding RNA genes. We approach this problem with the biologically motivated paradigm that scoring of...
JCB
2008
13 years 5 months ago
2008
Abstract. RNA shapes, introduced by Giegerich et al. (17), provide a useful classification of the branching complexity for RNA secondary structures. In this paper, we derive an exa...
BMCBI
2008
13 years 5 months ago
2008
Background: The ability to access, search and analyse secondary structures of a large set of known RNA molecules is very important for deriving improved RNA energy models, for eva...