85 search results - page 1 / 17 » Comparison of Exact String Matching Algorithms for Biologica... |
BIRD
2008
Springer
13 years 6 months ago
2008
Springer
Exact matching of single patterns in DNA and amino acid sequences is studied. We performed an extensive experimental comparison of algorithms presented in the literature. In additi...
CPM
2009
Springer
13 years 8 months ago
2009
Springer
We present a new efficient algorithm for exact matching in encoded DNA sequences and on binary strings. Our algorithm combines a multi-pattern version of the Bndm algorithm and a s...
ISPAN
1997
IEEE
13 years 9 months ago
1997
IEEE
Abstract- String matching problem received much attention over the years due to its importance in various applications such as text/file comparison, DNA sequencing, search engines,...
ICPR
2010
IEEE
13 years 8 months ago
2010
IEEE
We present a general, simple feature representation of sequences that allows efficient inexact matching, comparison and classification of sequential data. This approach, recently ...
BMCBI
2008
13 years 4 months ago
2008
Background: The use of novel algorithmic techniques is pivotal to many important problems in life science. For example the sequencing of the human genome [1] would not have been p...