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» Compiled hardware acceleration of Molecular Dynamics code
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ICCD
1993
IEEE
111views Hardware» more  ICCD 1993»
13 years 10 months ago
Ravel-XL: A Hardware Accelerator for Assigned-Delay Compiled-Code Logic Gate Simulation
Ravel-XL is a single-boardhardware accelerator for gate-level digital logic simulation. It uses a standard levelizedcode approach to statically schedule gate evaluations.However, u...
Michael A. Riepe, João P. Marques Silva, Ka...
FCCM
2006
IEEE
201views VLSI» more  FCCM 2006»
13 years 9 months ago
Hardware/Software Approach to Molecular Dynamics on Reconfigurable Computers
With advances in reconfigurable hardware, especially field-programmable gate arrays (FPGAs), it has become possible to use reconfigurable hardware to accelerate complex applicatio...
Ronald Scrofano, Maya Gokhale, Frans Trouw, Viktor...
JCPHY
2011
192views more  JCPHY 2011»
12 years 8 months ago
Fast analysis of molecular dynamics trajectories with graphics processing units - Radial distribution function histogramming
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...
Benjamin G. Levine, John E. Stone, Axel Kohlmeyer
FCCM
2005
IEEE
96views VLSI» more  FCCM 2005»
13 years 11 months ago
Preliminary Report: FPGA Acceleration of Molecular Dynamics Computations
Abstract: Molecular Dynamics (MD) is of central importance to computational chemistry and its myriad applications. Here we show that, at even a preliminary stage of development, MD...
Yongfeng Gu, Tom Van Court, Douglas DiSabello, Mar...