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» Composition of Path Transductions
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DLT
2006
13 years 6 months ago
On Weakly Ambiguous Finite Transducers
By weakly ambiguous (finite) transducers we mean those transducers that, although being ambiguous, may be viewed to be at arm's length from unambiguity. We define input-unambi...
Nicolae Santean, Sheng Yu
WABI
2007
Springer
109views Bioinformatics» more  WABI 2007»
13 years 11 months ago
A Novel Method for Signal Transduction Network Inference from Indirect Experimental Evidence
In this paper we introduce a new method of combined synthesis and inference of biological signal transduction networks. A main idea of our method lies in representing observed cau...
Réka Albert, Bhaskar DasGupta, Riccardo Don...
BMCBI
2006
117views more  BMCBI 2006»
13 years 5 months ago
SigFlux: A novel network feature to evaluate the importance of proteins in signal transduction networks
Background: Measuring each protein's importance in signaling networks helps to identify the crucial proteins in a cellular process, find the fragile portion of the biology sy...
Wei Liu, Dong Li, Jiyang Zhang, Yunping Zhu, Fuchu...
BMCBI
2010
110views more  BMCBI 2010»
13 years 5 months ago
Towards the systematic discovery of signal transduction networks using phosphorylation dynamics data
Background: Phosphorylation is a ubiquitous and fundamental regulatory mechanism that controls signal transduction in living cells. The number of identified phosphoproteins and th...
Haruna Imamura, Nozomu Yachie, Rintaro Saito, Yasu...
BMCBI
2007
140views more  BMCBI 2007»
13 years 5 months ago
Investigations into the relationship between feedback loops and functional importance of a signal transduction network based on
Background: A number of studies on biological networks have been carried out to unravel the topological characteristics that can explain the functional importance of network nodes...
Yung-Keun Kwon, Sun Shim Choi, Kwang-Hyun Cho