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BMCBI
2008
117views more  BMCBI 2008»
13 years 5 months ago
RNACompress: Grammar-based compression and informational complexity measurement of RNA secondary structure
Background: With the rapid emergence of RNA databases and newly identified non-coding RNAs, an efficient compression algorithm for RNA sequence and structural information is neede...
Qi Liu, Yu Yang, Chun Chen, Jiajun Bu, Yin Zhang, ...
WADS
2009
Springer
265views Algorithms» more  WADS 2009»
14 years 10 days ago
A Distribution-Sensitive Dictionary with Low Space Overhead
The time required for a sequence of operations on a data structure is usually measured in terms of the worst possible such sequence. This, however, is often an overestimate of the ...
Prosenjit Bose, John Howat, Pat Morin
DCC
2008
IEEE
14 years 6 days ago
Adaptive Compression of Graph Structured Text
In this paper we introduce an adaptive technique for compressing small quantities of text which are organized as a rooted directed graph. We impose a constraint on the technique s...
John Gilbert, David M. Abrahamson
SIGPRO
2010
137views more  SIGPRO 2010»
13 years 4 months ago
Satellite image compression by post-transforms in the wavelet domain
This paper proposes a novel compression scheme with a tunable complexity-ratedistortion trade-off. As images increase in size and resolution, more efficient compression schemes w...
Xavier Delaunay, Marie Chabert, Vincent Charvillat...
CSB
2002
IEEE
221views Bioinformatics» more  CSB 2002»
13 years 10 months ago
DNA Sequence Compression Using the Burrows-Wheeler Transform
-- We investigate off-line dictionary oriented approaches to DNA sequence compression, based on the Burrows-Wheeler Transform (BWT). The preponderance of short repeating patterns i...
Donald A. Adjeroh, Yong Zhang, Amar Mukherjee, Mat...