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» Computation of Median Gene Clusters
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RECOMB
2010
Springer
13 years 3 months ago
Consistency of Sequence-Based Gene Clusters
In comparative genomics, various combinatorial models can be used to specify gene clusters — groups of genes that are co-located in a set of genomes. Several approaches have been...
Roland Wittler, Jens Stoye
ICCV
2009
IEEE
14 years 9 months ago
Mode-Detection via Median-Shift
Median-shift is a mode seeking algorithm that relies on computing the median of local neighborhoods, instead of the mean. We further combine median-shift with Locality Sensitive...
Lior Shapira, Shai Avidan, Ariel Shamir
ICPR
2008
IEEE
14 years 6 months ago
K-means clustering of proportional data using L1 distance
We present a new L1-distance-based k-means clustering algorithm to address the challenge of clustering high-dimensional proportional vectors. The new algorithm explicitly incorpor...
Bonnie K. Ray, Hisashi Kashima, Jianying Hu, Monin...
RECOMB
2007
Springer
14 years 5 months ago
Improving Inversion Median Computation Using Commuting Reversals and Cycle Information
In the past decade, genome rearrangements have attracted increasing attention from both biologists and computer scientists as a new type of data for phylogenetic analysis. Methods ...
William Arndt, Jijun Tang