91 search results - page 2 / 19 » Computational RNA secondary structure design: empirical comp... |
BMCBI
2004
13 years 5 months ago
2004
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
IPPS
2008
IEEE
13 years 11 months ago
2008
IEEE
Despite the computing power of emerging technologies, predicting long RNA secondary structures with thermodynamics-based methods is still infeasible, especially if the structures ...
ICASSP
2008
IEEE
13 years 11 months ago
2008
IEEE
We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
BMCBI
2008
13 years 5 months ago
2008
Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
CSB
2004
IEEE
13 years 9 months ago
2004
IEEE
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...