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    BIOCOMP
    2009
    162views Bioinformatics» more  BIOCOMP 2009»
    Consensus RNA Secondary Structure Prediction by Ranking k-Length Stems
    13 years 7 months ago
    Consensus RNA Secondary Structure Prediction by Ranking k-Length Stems
    Download  tandem.bu.edu
    The accurate computational prediction of RNA secondary structures is a difficult task, but an important one, since RNA structure is usually more evolutionarily conserved than prima...
    Denise Y. F. Mak, Gary Benson
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    BMCBI
    2008
    109views more  BMCBI 2008»
    ConStruct: Improved construction of RNA consensus structures
    13 years 5 months ago
    ConStruct: Improved construction of RNA consensus structures
    Download  www.biomedcentral.com
    Background: Aligning homologous non-coding RNAs (ncRNAs) correctly in terms of sequence and structure is an unresolved problem, due to both mathematical complexity and imperfect s...
    Andreas Wilm, Kornelia Linnenbrink, Gerhard Steger
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    BMCBI
    2006
    141views more  BMCBI 2006»
    Identification of consensus RNA secondary structures using suffix arrays
    13 years 5 months ago
    Identification of consensus RNA secondary structures using suffix arrays
    Download  www.biomedcentral.com
    Background: The identification of a consensus RNA motif often consists in finding a conserved secondary structure with minimum free energy in an ensemble of aligned sequences. How...
    Mohammad Anwar, Truong Nguyen, Marcel Turcotte
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    BMCBI
    2008
    134views more  BMCBI 2008»
    Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites
    13 years 5 months ago
    Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites
    Download  www.biomedcentral.com
    Background: Utilization of alternative initiation sites for protein translation directed by non-AUG codons in mammalian mRNAs is observed with increasing frequency. Alternative in...
    Jill L. Wegrzyn, Thomas M. Drudge, Faramarz Valafa...
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    BIOCOMP
    2006
    134views Bioinformatics» more  BIOCOMP 2006»
    An Approach to Selecting Putative RNA Motifs Using MDL Principle
    13 years 7 months ago
    An Approach to Selecting Putative RNA Motifs Using MDL Principle
    Download  www.site.uottawa.ca
    The history of molecular biology is punctuated by a series of discoveries demonstrating the surprising breadth of biological roles of ribonucleic acid (RNA). An ensemble of evoluti...
    Mohammad Anwar, Marcel Turcotte
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