549 search results - page 2 / 110 » Constraint Programming in Structural Bioinformatics |
TCBB
2010
13 years 3 months ago
2010
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
EUROPAR
2004
Springer
13 years 10 months ago
2004
Springer
Abstract. Parallel program design patterns provide users a new way to get parallel programs without much effort. However, it is always a serious limitation for most existing parall...
BMCBI
2002
13 years 5 months ago
2002
Background: SeqHound has been developed as an integrated biological sequence, taxonomy, annotation and 3-D structure database system. It provides a high-performance server platfor...
CSB
2005
IEEE
13 years 11 months ago
2005
IEEE
A linear programming algorithm is presented to constructively compute thermodynamically feasible fluxes and change in chemical potentials of reactions for a metabolic network. It...
JMLR
2012
11 years 7 months ago
2012
Reducing the number of labeled examples required to learn accurate prediction models is an important problem in structured output prediction. In this paper we propose a new transd...