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» Constraints: The Ties that Bind
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BIBM
2010
IEEE
161views Bioinformatics» more  BIBM 2010»
13 years 3 months ago
Cis-regulatory module detection using constraint programming
We propose a method for finding CRMs in a set of co-regulated genes. Each CRM consists of a set of binding sites of transcription factors. We wish to find CRMs involving the same t...
Tias Guns, Hong Sun, Kathleen Marchal, Siegfried N...
COLING
1990
13 years 7 months ago
Modeling syntactic constraints on anaphoric binding
Mary Dalrymple, John Maxwell, Annie Zaenen
BMCBI
2010
105views more  BMCBI 2010»
13 years 5 months ago
A knowledge-guided strategy for improving the accuracy of scoring functions in binding affinity prediction
Background: Current scoring functions are not very successful in protein-ligand binding affinity prediction albeit their popularity in structure-based drug designs. Here, we propo...
Tiejun Cheng, Zhihai Liu, Renxiao Wang
ICLP
2007
Springer
13 years 12 months ago
Universal Timed Concurrent Constraint Programming
Abstract In this doctoral work we aim at developing a rich timed concurrent constraint (tcc) based language with strong ties to logic. The new calculus called Universal Timed Concu...
Carlos Olarte, Catuscia Palamidessi, Frank Valenci...
DAC
1989
ACM
13 years 9 months ago
Scheduling and Binding Algorithms for High-Level Synthesis
- New algorithms for high-level synthesis are presented. The first performs scheduling under hardware resource constraints and improves on commonly used list scheduling techniques ...
Pierre G. Paulin, John P. Knight