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» DIP: the Database of Interacting Proteins
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NAR
2000
118views more  NAR 2000»
13 years 4 months ago
DIP: the Database of Interacting Proteins
The Database of Interacting Proteins (DIP; http:// dip.doe-mbi.ucla.edu) is a database that documents experimentally determined protein
Ioannis Xenarios, Danny W. Rice, Lukasz Salw&iacut...
ENGL
2008
121views more  ENGL 2008»
13 years 4 months ago
Prediction of Protein-Protein Interactions Using Pairwise Alignment and Inter-Domain Linker Region
One of the central problems in modern biology is to identify the complete set of interactions among the proteins in a cell. The structural interaction of proteins and their domains...
Nazar Zaki
ICDM
2003
IEEE
148views Data Mining» more  ICDM 2003»
13 years 10 months ago
Inference of Protein-Protein Interactions by Unlikely Profile Pair
We note that a set of statistically “unusual” proteinprofile pairs in experimentally determined database of protein-protein interactions can typify protein-protein interaction...
Byung-Hoon Park, George Ostrouchov, Gong-Xin Yu, A...
BMCBI
2008
121views more  BMCBI 2008»
13 years 5 months ago
iRefIndex: A consolidated protein interaction database with provenance
Background: Interaction data for a given protein may be spread across multiple databases. We set out to create a unifying index that would facilitate searching for these data and ...
Sabry Razick, George Magklaras, Ian M. Donaldson
BMCBI
2007
107views more  BMCBI 2007»
13 years 5 months ago
Reuse of structural domain-domain interactions in protein networks
Background: Protein interactions are thought to be largely mediated by interactions between structural domains. Databases such as iPfam relate interactions in protein structures t...
Benjamin Schuster-Böckler, Alex Bateman