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» DNA coding using finite-context models and arithmetic coding
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IBPRIA
2009
Springer
13 years 9 months ago
Variable Order Finite-Context Models in DNA Sequence Coding
Abstract. Being an essential key in biological research, the DNA sequences are often shared between researchers and digitally stored for future use. As these sequences grow in volu...
Daniel A. Martins, António J. R. Neves, Arm...
ICASSP
2009
IEEE
13 years 11 months ago
DNA coding using finite-context models and arithmetic coding
The interest in DNA coding has been growing with the availability of extensive genomic databases. Although only two bits are sufficient to encode the four DNA bases, efficient l...
Armando J. Pinho, António J. R. Neves, Carl...
DNA
2007
Springer
106views Bioinformatics» more  DNA 2007»
13 years 8 months ago
Hardware Acceleration for Thermodynamic Constrained DNA Code Generation
Reliable DNA computing requires a large pool of oligonucleotides that do not produce cross-hybridize. In this paper, we present a transformed algorithm to calculate the maximum wei...
Qinru Qiu, Prakash Mukre, Morgan Bishop, Daniel J....
CORR
2007
Springer
154views Education» more  CORR 2007»
13 years 4 months ago
Distributed Arithmetic Coding for the Asymmetric Slepian-Wolf problem
Distributed source coding schemes are typically based on the use of channels codes as source codes. In this paper we propose a new paradigm, termed “distributed arithmetic codin...
Marco Grangetto, Enrico Magli, Gabriella Olmo
ICASSP
2011
IEEE
12 years 8 months ago
Region-adaptive probability model selection for the arithmetic coding of video texture
In video coding systems using adaptive arithmetic coding to compress texture information, the employed symbol probability models need to be retrained every time the coding process...
Kenneth Vermeirsch, Joeri Barbarien, Peter Lambert...