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JCB
2002
108views more  JCB 2002»
13 years 5 months ago
Fast and Accurate Phylogeny Reconstruction Algorithms Based on the Minimum-Evolution Principle
This paper investigates the standard ordinary least-squares version 24 and the balanced version 20 of the minimum evolution principle. For the standard version, we provide a greedy...
Richard Desper, Olivier Gascuel
NIS
1998
131views more  NIS 1998»
13 years 5 months ago
Dynamic Memory Allocation for Large Query Execution
The execution time of a large query depends mainly on the memory utilization which should avoid disk accesses for intermediate results. Poor memory management can hurt performance ...
Luc Bouganim, Olga Kapitskaia, Patrick Valduriez
NAR
2007
121views more  NAR 2007»
13 years 5 months ago
WormBase: new content and better access
WormBase (http://wormbase.org), a model organism database for Caenorhabditis elegans and other related nematodes, continues to evolve and expand. Over the past year WormBase has a...
Tamberlyn Bieri, Darin Blasiar, Philip Ozersky, Ig...
SCFBM
2008
131views more  SCFBM 2008»
13 years 5 months ago
FASH: A web application for nucleotides sequence search
: FASH (Fourier Alignment Sequence Heuristics) is a web application, based on the Fast Fourier Transform, for finding remote homologs within a long nucleic acid sequence. Given a ...
Isana Veksler-Lublinsky, Danny Barash, Chai Avisar...
BMCBI
2011
13 years 1 months ago
Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips
Background: Illumina’s Infinium SNP BeadChips are extensively used in both small and large-scale genetic studies. A fundamental step in any analysis is the processing of raw all...
Matthew E. Ritchie, Ruijie Liu, Benilton Carvalho,...
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