36 search results - page 3 / 8 » Detailed protein sequence alignment based on Spectral Simila... |
WABI
2007
Springer
13 years 12 months ago
2007
Springer
Abstract. Protein structural alignment is an indispensable tool used for many different studies in bioinformatics. Most structural alignment algorithms assume that the structural ...
ICML
2007
IEEE
14 years 6 months ago
2007
IEEE
Structural alignments are the most widely used tools for comparing proteins with low sequence similarity. The main contribution of this paper is to derive various kernels on prote...
BMCBI
2006
13 years 5 months ago
2006
Background: A structure alignment method based on a local geometric property is presented and its performance is tested in pairwise and multiple structure alignments. In this appr...
BMCBI
2008
13 years 5 months ago
2008
Background: Identifying the active site of an enzyme is a crucial step in functional studies. While protein sequences and structures can be experimentally characterized, determini...
BMCBI
2007
13 years 5 months ago
2007
Background: Mass spectrometry based peptide mass fingerprints (PMFs) offer a fast, efficient, and robust method for protein identification. A protein is digested (usually by tryps...