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» Detecting Gene Relations from MEDLINE Abstracts
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BMCBI
2005
152views more  BMCBI 2005»
13 years 5 months ago
Ranking the whole MEDLINE database according to a large training set using text indexing
Background: The MEDLINE database contains over 12 million references to scientific literature, ut 3/4 of recent articles including an abstract of the publication. Retrieval of ent...
Brian P. Suomela, Miguel A. Andrade
KES
2005
Springer
13 years 11 months ago
Extraction of Lexico-Syntactic Information and Acquisition of Causality Schemas for Text Annotation
We present the INSYSE method for the annotation of texts, based on extraction of semantic relations from syntactic structures. We is method to a corpus of 5000 Medline abstracts ab...
Laurent Alamarguy, Rose Dieng-Kuntz, Catherine Far...
PSB
2001
13 years 7 months ago
PIES, A Protein Interaction Extraction System
We consider the problem of extracting, manipulating, and managing biological pathways, especially protein-protein interaction pathways. We discuss here the Protein Interaction Ext...
Limsoon Wong
CSB
2004
IEEE
136views Bioinformatics» more  CSB 2004»
13 years 9 months ago
AZuRE, a Scalable System for Automated Term Disambiguation of Gene and Protein Names
Researchers, hindered by a lack of standard gene and protein-naming conventions, endure long, sometimes fruitless, literature searches. A system is described which is able to auto...
Raf M. Podowski, John G. Cleary, Nicholas T. Gonch...
BMCBI
2010
129views more  BMCBI 2010»
13 years 5 months ago
LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships
Background: Biological knowledge is represented in scientific literature that often describes the function of genes/ proteins (bioentities) in terms of their interactions (biointe...
Adriano Barbosa-Silva, Theodoros G. Soldatos, Ivan...