Sciweavers

254 search results - page 3 / 51
» Discrete Simulations of Biochemical Dynamics
Sort
View
FPGA
2004
ACM
174views FPGA» more  FPGA 2004»
13 years 11 months ago
A compiled accelerator for biological cell signaling simulations
The simulation of large systems of biochemical reactions is a key part of research into molecular signaling and information processing in biological cells. However, it can be impr...
John F. Keane, Christopher Bradley, Carl Ebeling
BMCBI
2005
156views more  BMCBI 2005»
13 years 5 months ago
A new dynamical layout algorithm for complex biochemical reaction networks
Background: To study complex biochemical reaction networks in living cells researchers more and more rely on databases and computational methods. In order to facilitate computatio...
Katja Wegner, Ursula Kummer
JCB
2006
91views more  JCB 2006»
13 years 5 months ago
Reverse Engineering Discrete Dynamical Systems from Data Sets with Random Input Vectors
Recently a new algorithm for reverse engineering of biochemical networks was developed by Laubenbacher and Stigler. It is based on methods from computational algebra and finds mos...
Winfried Just
CMSB
2008
Springer
13 years 7 months ago
Automatic Complexity Analysis and Model Reduction of Nonlinear Biochemical Systems
Kinetic models for biochemical systems often comprise a large amount of coupled differential equations with species concentrations varying on different time scales. In this paper w...
Dirk Lebiedz, Dominik Skanda, Marc Fein
BMCBI
2007
147views more  BMCBI 2007»
13 years 5 months ago
Modeling biochemical transformation processes and information processing with Narrator
Background: Software tools that model and simulate the dynamics of biological processes and systems are becoming increasingly important. Some of these tools offer sophisticated gr...
Johannes J. Mandel, Hendrik Fuß, Niall M. Pa...