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» Efficient Algorithms for the Tree Homeomorphism Problem
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VIS
2004
IEEE
170views Visualization» more  VIS 2004»
14 years 6 months ago
Guaranteed Quality Triangulation of Molecular Skin Surfaces
We present an efficient algorithm to mesh the macromolecules surface model represented by the skin surface defined by Edelsbrunner. Our algorithm overcomes several challenges resi...
Ho-Lun Cheng, Xinwei Shi
RECOMB
2007
Springer
14 years 5 months ago
QNet: A Tool for Querying Protein Interaction Networks
Molecular interaction databases can be used to study the evolution of molecular pathways across species. Querying such pathways is a challenging computational problem, and recent e...
Banu Dost, Tomer Shlomi, Nitin Gupta 0002, Eytan R...
COCOON
2005
Springer
13 years 10 months ago
On the Approximation of Computing Evolutionary Trees
Given a set of leaf-labelled trees with identical leaf sets, the well-known MAST problem consists of finding a subtree homeomorphically included in all input trees and with the la...
Vincent Berry, Sylvain Guillemot, François ...
ESOP
2009
Springer
13 years 8 months ago
An Efficient Algorithm for Solving the Dyck-CFL Reachability Problem on Trees
The context-free language (CFL) reachability problem is well known and studied in computer science, as a fundamental problem underlying many important static analyses such as point...
Hao Yuan, Patrick Th. Eugster
ISAAC
2001
Springer
99views Algorithms» more  ISAAC 2001»
13 years 9 months ago
Efficient Algorithms for Two Generalized 2-Median Problems on Trees
Shan-Chyun Ku, Chi-Jen Lu, Biing-Feng Wang, Tzu-Ch...