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RECOMB
2005
Springer
14 years 5 months ago
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis
Doron Lipson, Yonatan Aumann, Amir Ben-Dor, Nathan...
BMCBI
2006
174views more  BMCBI 2006»
13 years 4 months ago
CARAT: A novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays
Background: DNA copy number alterations are one of the main characteristics of the cancer cell karyotype and can contribute to the complex phenotype of these cells. These alterati...
Jing Huang, Wen Wei, Joyce Chen, Jane Zhang, Guoyi...
AMC
2006
173views more  AMC 2006»
13 years 4 months ago
Data envelopment analysis with missing values: An interval DEA approach
Missing values in inputs, outputs cannot be handled by the original data envelopment analysis (DEA) models. In this paper we introduce an approach based on interval DEA that allow...
Yannis G. Smirlis, Elias K. Maragos, Dimitris K. D...
BMCBI
2007
148views more  BMCBI 2007»
13 years 4 months ago
Computation of significance scores of unweighted Gene Set Enrichment Analyses
Background: Gene Set Enrichment Analysis (GSEA) is a computational method for the statistical evaluation of sorted lists of genes or proteins. Originally GSEA was developed for in...
Andreas Keller, Christina Backes, Hans-Peter Lenho...
BMCBI
2011
12 years 11 months ago
PICS-Ord: Unlimited Coding of Ambiguous Regions by Pairwise Identity and Cost Scores Ordination
Background: We present a novel method to encode ambiguously aligned regions in fixed multiple sequence alignments by ‘Pairwise Identity and Cost Scores Ordination’ (PICS-Ord)....
Robert K. Luecking, Brendan P. Hodkinson, Alexandr...