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» Efficient Pairing Computation with Theta Functions
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BMCBI
2006
122views more  BMCBI 2006»
13 years 5 months ago
PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data
Background: We recently developed the Paired End diTag (PET) strategy for efficient characterization of mammalian transcriptomes and genomes. The paired end nature of short PET se...
Kuo Ping Chiu, Chee-Hong Wong, Qiongyu Chen, Prami...
CSB
2004
IEEE
208views Bioinformatics» more  CSB 2004»
13 years 9 months ago
Pair Stochastic Tree Adjoining Grammars for Aligning and Predicting Pseudoknot RNA Structures
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...
Hiroshi Matsui, Kengo Sato, Yasubumi Sakakibara
BMCBI
2010
179views more  BMCBI 2010»
13 years 5 months ago
A semi-supervised learning approach to predict synthetic genetic interactions by combining functional and topological properties
Background: Genetic interaction profiles are highly informative and helpful for understanding the functional linkages between genes, and therefore have been extensively exploited ...
Zhuhong You, Zheng Yin, Kyungsook Han, De-Shuang H...
DEXA
2010
Springer
319views Database» more  DEXA 2010»
13 years 5 months ago
An Efficient Similarity Join Algorithm with Cosine Similarity Predicate
Given a large collection of objects, finding all pairs of similar objects, namely similarity join, is widely used to solve various problems in many application domains.Computation ...
Dongjoo Lee, Jaehui Park, Junho Shim, Sang-goo Lee
DAC
1989
ACM
13 years 9 months ago
An Efficient Finite Element Method for Submicron IC Capacitance Extraction
We present an accurate and efficient method for extraction of parasitic capacitances in submicron integrated circuits. The method uses a 3-D finite element model in which the cond...
N. P. van der Meijs, Arjan J. van Genderen