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» Energy-Based Hierarchical Edge Clustering of Graphs
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ICASSP
2011
IEEE
12 years 9 months ago
Polytope kernel density estimates on Delaunay graphs
We present a polytope-kernel density estimation (PKDE) methodology that allows us to perform exact mean-shift updates along the edges of the Delaunay graph of the data. We discuss...
Erhan Bas, Deniz Erdogmus
BIBE
2005
IEEE
154views Bioinformatics» more  BIBE 2005»
13 years 11 months ago
Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
Duygu Ucar, Srinivasan Parthasarathy, Sitaram Asur...
SDM
2009
SIAM
167views Data Mining» more  SDM 2009»
14 years 3 months ago
Detecting Communities in Social Networks Using Max-Min Modularity.
Many datasets can be described in the form of graphs or networks where nodes in the graph represent entities and edges represent relationships between pairs of entities. A common ...
Jiyang Chen, Osmar R. Zaïane, Randy Goebel
BMCBI
2011
13 years 8 days ago
Properties of Metabolic Graphs: Biological Organization or Representation Artifacts?
Background: Standard graphs, where each edge links two nodes, have been extensively used to represent the connectivity of metabolic networks. It is based on this representation th...
Wanding Zhou, Luay Nakhleh
WALCOM
2010
IEEE
255views Algorithms» more  WALCOM 2010»
14 years 22 days ago
A Global k-Level Crossing Reduction Algorithm
Abstract. Directed graphs are commonly drawn by the Sugiyama algorithm, where crossing reduction is a crucial phase. It is done by repeated one-sided 2-level crossing minimizations...
Christian Bachmaier, Franz-Josef Brandenburg, Wolf...