We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Many state-of-the-art statistical parsers for English can be viewed as Probabilistic Context-Free Grammars (PCFGs) acquired from treebanks consisting of phrase-structure trees enri...
A novel description of protein structure in terms of the generalized secondary structure elements (GSSE) is proposed. GSSE's are defined as fragments of the protein structure...
In language learning, strong relationships between Gold-style models and query models have recently been observed: in some quite general setting Gold-style learners can be replaced...
We argue that a roadmap for software engineering and the Internet currently should be based on standards for complex data and document structures, like the Extensible Markup Langu...