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BMCBI
2007
97views more  BMCBI 2007»
13 years 5 months ago
Relating destabilizing regions to known functional sites in proteins
Background: Most methods for predicting functional sites in protein 3D structures, rely on information on related proteins and cannot be applied to proteins with no known relative...
Benoit H. Dessailly, Marc F. Lensink, Shoshana J. ...
BMCBI
2008
178views more  BMCBI 2008»
13 years 5 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...
CCS
2008
ACM
13 years 7 months ago
Privacy oracle: a system for finding application leaks with black box differential testing
We describe the design and implementation of Privacy Oracle, a system that reports on application leaks of user information via the network traffic that they send. Privacy Oracle ...
Jaeyeon Jung, Anmol Sheth, Ben Greenstein, David W...
BIODATAMINING
2008
117views more  BIODATAMINING 2008»
13 years 5 months ago
Search extension transforms Wiki into a relational system: A case for flavonoid metabolite database
Background: In computer science, database systems are based on the relational model founded by Edgar Codd in 1970. On the other hand, in the area of biology the word 'databas...
Masanori Arita, Kazuhiro Suwa
BMCBI
2005
117views more  BMCBI 2005»
13 years 4 months ago
An SVM-based system for predicting protein subnuclear localizations
Background: The large gap between the number of protein sequences in databases and the number of functionally characterized proteins calls for the development of a fast computatio...
Zhengdeng Lei, Yang Dai