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BMCBI
2008
202views more  BMCBI 2008»
13 years 5 months ago
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
BMCBI
2005
131views more  BMCBI 2005»
13 years 5 months ago
Critical evaluation of the JDO API for the persistence and portability requirements of complex biological databases
Background: Complex biological database systems have become key computational tools used daily by scientists and researchers. Many of these systems must be capable of executing on...
Marko Srdanovic, Ulf Schenk, Michael Schwieger, Fa...
BMCBI
2008
155views more  BMCBI 2008»
13 years 5 months ago
ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts
Background: Once a new genome is sequenced, one of the important questions is to determine the presence and absence of biological pathways. Analysis of biological pathways in a ge...
Kwangmin Choi, Sun Kim
CF
2006
ACM
13 years 9 months ago
The potential of the cell processor for scientific computing
The slowing pace of commodity microprocessor performance improvements combined with ever-increasing chip power demands has become of utmost concern to computational scientists. As...
Samuel Williams, John Shalf, Leonid Oliker, Shoaib...
NEUROSCIENCE
2001
Springer
13 years 10 months ago
Biological Grounding of Recruitment Learning and Vicinal Algorithms in Long-Term Potentiation
Biological networks are capable of gradual learning based on observing a large number of exemplars over time as well as of rapidly memorizing specific events as a result of a sin...
Lokendra Shastri