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» Evaluation of Placement Techniques for DNA Probe Array Layou...
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ICCAD
2003
IEEE
170views Hardware» more  ICCAD 2003»
14 years 2 months ago
Evaluation of Placement Techniques for DNA Probe Array Layout
DNA probe arrays have emerged as a core genomic technology that enables cost-effective gene expression monitoring, mutation detection, single nucleotide polymorphism analysis and ...
Andrew B. Kahng, Ion I. Mandoiu, Sherief Reda, Xu ...
GCB
2006
Springer
158views Biometrics» more  GCB 2006»
13 years 9 months ago
Microarray Layout as Quadratic Assignment Problem
Abstract: The production of commercial DNA microarrays is based on a light-directed chemical synthesis driven by a set of masks or micromirror arrays. Because of the natural proper...
Sérgio A. de Carvalho, Sven Rahmann
BMCBI
2006
115views more  BMCBI 2006»
13 years 5 months ago
SimArray: a user-friendly and user-configurable microarray design tool
Background: Microarrays were first developed to assess gene expression but are now also used to map protein-binding sites and to assess allelic variation between individuals. Rega...
Richard P. Auburn, Roslin R. Russell, Bettina Fisc...
BMCBI
2002
119views more  BMCBI 2002»
13 years 5 months ago
Microarray results: how accurate are they?
Background: DNA microarray technology is a powerful technique that was recently developed in order to analyze thousands of genes in a short time. Presently, microarrays, or chips,...
Ravi Kothapalli, Sean J. Yoder, Shrikant Mane, Tho...
VLDB
2004
ACM
143views Database» more  VLDB 2004»
13 years 10 months ago
Clotho: Decoupling memory page layout from storage organization
As database application performance depends on the utilization of the memory hierarchy, smart data placement plays a central role in increasing locality and in improving memory ut...
Minglong Shao, Jiri Schindler, Steven W. Schlosser...