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BMCBI
2010
159views more  BMCBI 2010»
13 years 6 months ago
Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
Background: Protein-protein interaction (PPI) plays essential roles in cellular functions. The cost, time and other limitations associated with the current experimental methods ha...
Alvaro J. González, Li Liao
RECOMB
2005
Springer
14 years 6 months ago
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
Abstract. Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e. segmenta...
Yan Liu, Jaime G. Carbonell, Peter Weigele, Vanath...
BMCBI
2004
111views more  BMCBI 2004»
13 years 6 months ago
The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases
Background: The Hotdog fold was initially identified in the structure of Escherichia coli FabA and subsequently in 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. strain CB...
Shane C. Dillon, Alex Bateman
BMCBI
2008
98views more  BMCBI 2008»
13 years 6 months ago
PredGPI: a GPI-anchor predictor
Background: Several eukaryotic proteins associated to the extracellular leaflet of the plasma membrane carry a Glycosylphosphatidylinositol (GPI) anchor, which is linked to the C-...
Andrea Pierleoni, Pier Luigi Martelli, Rita Casadi...
KDD
2009
ACM
172views Data Mining» more  KDD 2009»
13 years 11 months ago
Learning dynamic temporal graphs for oil-production equipment monitoring system
Learning temporal graph structures from time series data reveals important dependency relationships between current observations and histories. Most previous work focuses on learn...
Yan Liu, Jayant R. Kalagnanam, Oivind Johnsen