23 search results - page 4 / 5 » Exploiting Multi-level Parallelism for Homology Search using... |
TC
2010
13 years 3 months ago
2010
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
ASPLOS
1992
ACM
13 years 9 months ago
1992
ACM
: In scalable parallel machines, processors can make local memory accesses much faster than they can make remote memory accesses. In addition, when a number of remote accesses must...
RECONFIG
2009
IEEE
14 years 21 hour ago
2009
IEEE
BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...
DAC
2009
ACM
14 years 6 months ago
2009
ACM
Logic simulation is a critical component of the design tool flow in modern hardware development efforts. It is used widely ? from high-level descriptions down to gate-level ones ?...
CODES
2007
IEEE
13 years 11 months ago
2007
IEEE
We address the problem of instruction selection for Multi-Output Instructions (MOIs), producing more than one result. Such inherently parallel hardware instructions are very commo...