The natural world is enormous, dynamic, incredibly diverse, and highly complex. Despite the inherent challenges of surviving in such a world, biological organisms evolve, self-org...
— Network reconstruction, i.e., obtaining network structure from data, is a central theme in systems biology, economics, and engineering. Previous work introduced dynamical struc...
Ye Yuan, Guy-Bart Vincent Stan, Sean Warnick, Jorg...
BioMediator is a data integration system that provides a common interface to multiple Internet-accessible databases containing information about genetics and molecular biology. Ont...
Background: A growing demand for tools to assist the building and analysis of biological networks exists in systems biology. We argue that the use of a formal approach is relevant...
One of the purposes of Systems Biology is the quantitative modeling of biochemical networks. In this effort, the use of dynamical mathematical models provides for powerful tools in...