— Biological networks are formalized summaries of our knowledge about interactions among biological system components, like genes, proteins, or metabolites. From their global top...
Log-linear and maximum-margin models are two commonly-used methods in supervised machine learning, and are frequently used in structured prediction problems. Efficient learning of...
Michael Collins, Amir Globerson, Terry Koo, Xavier...
In many real-world domains, undirected graphical models such as Markov random fields provide a more natural representation of the dependency structure than directed graphical mode...
Sushmita Roy, Terran Lane, Margaret Werner-Washbur...
A standard approach to large network visualization is to provide an overview of the network and a detailed view of a small component of the graph centred around a focal node. The u...
Tim Dwyer, Kim Marriott, Falk Schreiber, Peter J. ...
Motivation: Finding a good network null model for protein-protein interaction (PPI) networks is a fundamental issue. Such a model would provide insights into the interplay between...