20 search results - page 3 / 4 » Expresso: automatic incorporation of structural information ... |
ICASSP
2011
IEEE
12 years 9 months ago
2011
IEEE
TurboFold, an iterative algorithm for estimating the common secondary structures of multiple RNA homologs, is presented. The algorithm is motivated by and has structure and attrib...
CIKM
2009
Springer
13 years 12 months ago
2009
Springer
Background: Although both conservation and correlated mutation (CM) are important information reflecting the different sorts of context in multiple sequence alignment, most of ali...
RECOMB
2006
Springer
14 years 5 months ago
2006
Springer
In this paper, we present CONTRAlign, an extensible and fully automatic framework for parameter learning and protein pairwise sequence alignment using pair conditional random field...
BMCBI
2004
13 years 5 months ago
2004
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
BMCBI
2007
13 years 5 months ago
2007
Background: When aligning several hundreds or thousands of sequences, such as epidemic virus sequences or homologous/orthologous sequences of some big gene families, to reconstruc...