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    ACL
    2004
    114views Computational Linguistics» more  ACL 2004»
    Extracting Regulatory Gene Expression Networks From Pubmed
    13 years 6 months ago
    Extracting Regulatory Gene Expression Networks From Pubmed
    Download  acl.ldc.upenn.edu
    We present an approach using syntactosemantic rules for the extraction of relational information from biomedical abstracts. The results show that by overcoming the hurdle of techn...
    Jasmin Saric, Lars Juhl Jensen, Peer Bork, Rossitz...
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    BMCBI
    2007
    151views more  BMCBI 2007»
    A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microar
    13 years 4 months ago
    A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microar
    Download  www.biomedcentral.com
    Background: The incorporation of prior biological knowledge in the analysis of microarray data has become important in the reconstruction of transcription regulatory networks in a...
    Peter Larsen, Eyad Almasri, Guanrao Chen, Yang Dai
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    BIOCOMP
    2006
    233views Bioinformatics» more  BIOCOMP 2006»
    Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
    13 years 6 months ago
    Dynamic Bayesian Network (DBN) with Structure Expectation Maximization (SEM) for Modeling of Gene Network from Time Series Gene
    Download  ww1.ucmss.com
    Exploring gene regulatory network is a key topic in molecular biology. In this paper, we present a new dynamic Bayesian network (DBN) framework embedded with structural expectatio...
    Yu Zhang, Zhidong Deng, Hongshan Jiang, Peifa Jia
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    CEC
    2003
    IEEE
    134views Artificial Intelligence» more  CEC 2003»
    Dynamics of gene expression in an artificial genome
    13 years 8 months ago
    Dynamics of gene expression in an artificial genome
    Download  fias.uni-frankfurt.de
    Abstract- Complex systems techniques provide a powerful tool to study the emergent properties of networks of interacting genes. In this study we extract models of genetic regulator...
    Kai Willadsen, Janet Wiles
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    BMCBI
    2007
    169views more  BMCBI 2007»
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
    13 years 4 months ago
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
    Download  www.biomedcentral.com
    Background: The central role of transcription factors (TFs) in higher eukaryotes has led to much interest in deciphering transcriptional regulatory interactions. Even in the best ...
    Henning Redestig, Daniel Weicht, Joachim Selbig, M...
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