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CAV
1999
Springer
119views Hardware» more  CAV 1999»
13 years 9 months ago
A Theory of Restrictions for Logics and Automata
BDDs and their algorithms implement a decision procedure for Quanti ed Propositional Logic. BDDs are a kind of acyclic automata. Unrestricted automata (recognizing unbounded string...
Nils Klarlund
ALMOB
2006
155views more  ALMOB 2006»
13 years 5 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
SIMPRA
2008
131views more  SIMPRA 2008»
13 years 5 months ago
Distributed simulation of DEVS and Cell-DEVS models in CD++ using Web-Services
: DEVS is a Modeling and Simulation formalism that has been widely used to study the dynamics of discrete event systems. Cell-DEVS is a DEVS-based formalism that defines spatial mo...
Gabriel A. Wainer, Rami Madhoun, Khaldoon Al-Zoubi
BMCBI
2006
114views more  BMCBI 2006»
13 years 5 months ago
Mining frequent patterns for AMP-activated protein kinase regulation on skeletal muscle
Background: AMP-activated protein kinase (AMPK) has emerged as a significant signaling intermediary that regulates metabolisms in response to energy demand and supply. An investig...
Qingfeng Chen, Yi-Ping Phoebe Chen
BMCBI
2011
13 years 4 days ago
Appearance frequency modulated gene set enrichment testing
Background: Gene set enrichment testing has helped bridge the gap from an individual gene to a systems biology interpretation of microarray data. Although gene sets are defined a ...
Jun Ma, Maureen A. Sartor, H. V. Jagadish