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BIOINFORMATICS
2010
78views more  BIOINFORMATICS 2010»
13 years 4 months ago
Fast overlapping of protein contact maps by alignment of eigenvectors
Pietro di Lena, Piero Fariselli, Luciano Margara, ...
BIRD
2007
Springer
120views Bioinformatics» more  BIRD 2007»
13 years 11 months ago
Joining Softassign and Dynamic Programming for the Contact Map Overlap Problem
Comparison of 3-dimensional protein folds is a core problem in molecular biology. The Contact Map Overlap (CMO) scheme provides one of the most common measures for protein structur...
Brijnesh J. Jain, Michael Lappe
JCB
2007
168views more  JCB 2007»
13 years 4 months ago
Fast Molecular Shape Matching Using Contact Maps
In this paper, we study the problem of computing the similarity of two protein structures ring their contact-map overlap. Contact-map overlap abstracts the problem of computing th...
Pankaj K. Agarwal, Nabil H. Mustafa, Yusu Wang
BMCBI
2008
121views more  BMCBI 2008»
13 years 4 months ago
A simple and fast heuristic for protein structure comparison
Background: Protein structure comparison is a key problem in bioinformatics. There exist several methods for doing protein comparison, being the solution of the Maximum Contact Ma...
David A. Pelta, Juan Ramón González,...