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RECOMB
2004
Springer
14 years 5 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir
ISPAN
2009
IEEE
13 years 12 months ago
High-Performance Cloud Computing: A View of Scientific Applications
— Scientific computing often requires the availability of a massive number of computers for performing large scale experiments. Traditionally, these needs have been addressed by ...
Christian Vecchiola, Suraj Pandey, Rajkumar Buyya
BMCBI
2007
111views more  BMCBI 2007»
13 years 5 months ago
Modular co-evolution of metabolic networks
Background: The architecture of biological networks has been reported to exhibit high level of modularity, and to some extent, topological modules of networks overlap with known f...
Jing Zhao, Guohui Ding, Lin Tao, Hong Yu, Zhong-Ha...
PKDD
2005
Springer
123views Data Mining» more  PKDD 2005»
13 years 10 months ago
A Multi-metric Index for Euclidean and Periodic Matching
In many classification and data-mining applications the user does not know a priori which distance measure is the most appropriate for the task at hand without examining the produ...
Michail Vlachos, Zografoula Vagena, Vittorio Caste...
BMCBI
2008
128views more  BMCBI 2008»
13 years 5 months ago
SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically drive
Background: Many programs have been developed to identify transcription factor binding sites. However, most of them are not able to infer two-word motifs with variable spacer leng...
Fabrice Touzain, Sophie Schbath, Isabelle Debled-R...