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ECAI
2010
Springer
13 years 6 months ago
Learning to Author Text with textual CBR
Abstract. Textual reuse is an integral part of textual case-based reasoning (TCBR) which deals with solving new problems by reusing previous similar problem-solving experiences doc...
Ibrahim Adeyanju, Nirmalie Wiratunga, Juan A. Reci...
BMCBI
2005
100views more  BMCBI 2005»
13 years 5 months ago
EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments
Background: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold ...
Jean-Christophe Gelly, Laurent Chiche, Jér&...
ICASSP
2007
IEEE
14 years 2 days ago
Evolutionary Sequence Modeling for Discovery of Peptide Hormones
There are currently a large number of ‘‘orphan’’ G-protein-coupled receptors (GPCRs) whose endogenous ligands (peptide hormones) are unknown. Identification of these pepti...
M. Kemal Sönmez, Lawrence Toll, Nina Zaveri
BIBE
2005
IEEE
13 years 11 months ago
Improved Phylogenetic Motif Detection Using Parsimony
We have recently demonstrated (La et al, Proteins, 58:2005) that sequence fragments approximating the overall familial phylogeny, called phylogenetic motifs (PMs), represent a pro...
Usman Roshan, Dennis R. Livesay, David La
JCC
2010
105views more  JCC 2010»
13 years 4 months ago
Fast determination of the optimal rotational matrix for macromolecular superpositions
: Finding the rotational matrix that minimizes the sum of squared deviations between two vectors is an important problem in bioinformatics and crystallography. Traditional algorith...
Pu Liu, Dimitris K. Agrafiotis, Douglas L. Theobal...