7 search results - page 1 / 2 » FlexStem: improving predictions of RNA secondary structures ... |
BIOINFORMATICS
2008
13 years 5 months ago
2008
BIBE
2007
IEEE
13 years 11 months ago
2007
IEEE
-We demonstrate a new algorithm named FlexStem to predict RNA secondary structures with pseudoknots. Our approach is based on the free energy minimization criterion, and utilizes a...
APBC
2004
13 years 6 months ago
2004
Pseudoknots are widely occurring structural motifs in RNA. Pseudoknots have been shown to be functionally important in different RNAs which play regulatory, catalytic, or structur...
WABI
2010
Springer
13 years 3 months ago
2010
Springer
Background: Although many RNA molecules contain pseudoknots, computational prediction of pseudoknotted RNA structure is still in its infancy due to high running time and space con...
IJBRA
2006
13 years 5 months ago
2006
: Stochastic Context-Free Grammars (SCFG) has been shown to be effective in modelling RNA secondary structure for searches. Our previous work (Cai et al., 2003) in Stochastic Paral...