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» Folding Variant Narrowing and Optimal Variant Termination
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WRLA
2010
13 years 3 months ago
Folding Variant Narrowing and Optimal Variant Termination
Abstract. If a set of equations E∪Ax is such that E is confluent, terminating, and coherent modulo Ax, narrowing with E modulo Ax provides a complete E∪Ax-unification algorit...
Santiago Escobar, Ralf Sasse, José Meseguer
GECCO
2007
Springer
211views Optimization» more  GECCO 2007»
13 years 11 months ago
An extremal optimization search method for the protein folding problem: the go-model example
The protein folding problem consists of predicting the functional (native) structure of the protein given its linear sequence of amino acids. Despite extensive progress made in un...
Alena Shmygelska
SGP
2007
13 years 7 months ago
Triangulations with locally optimal Steiner points
We present two new Delaunay refinement algorithms, second an extension of the first. For a given input domain (a set of points or a planar straight line graph), and a threshold an...
Hale Erten, Alper Üngör
ATMOS
2010
134views Optimization» more  ATMOS 2010»
13 years 4 months ago
Vertex Disjoint Paths for Dispatching in Railways
We study variants of the vertex disjoint paths problem in planar graphs where paths have to be selected from a given set of paths. We study the problem as a decision, maximization...
Holger Flier, Matús Mihalák, Anita S...
RECOMB
2008
Springer
14 years 5 months ago
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins
Abstract. In engineering protein variants by constructing and screening combinatorial libraries of chimeric proteins, two complementary and competing goals are desired: the new pro...
Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg