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» GAKREM: A novel hybrid clustering algorithm
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BIBE
2008
IEEE
142views Bioinformatics» more  BIBE 2008»
13 years 11 months ago
Optimizing performance, cost, and sensitivity in pairwise sequence search on a cluster of PlayStations
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
Ashwin M. Aji, Wu-chun Feng
KDD
1997
ACM
159views Data Mining» more  KDD 1997»
13 years 9 months ago
New Algorithms for Fast Discovery of Association Rules
Discovery of association rules is an important problem in database mining. In this paper we present new algorithms for fast association mining, which scan the database only once, ...
Mohammed Javeed Zaki, Srinivasan Parthasarathy, Mi...
IJCAI
2007
13 years 6 months ago
MB-DPOP: A New Memory-Bounded Algorithm for Distributed Optimization
In distributed combinatorial optimization problems, dynamic programming algorithms like DPOP ([Petcu and Faltings, 2005]) require only a linear number of messages, thus generating...
Adrian Petcu, Boi Faltings
SPAA
2012
ACM
11 years 7 months ago
A scalable framework for heterogeneous GPU-based clusters
GPU-based heterogeneous clusters continue to draw attention from vendors and HPC users due to their high energy efficiency and much improved single-node computational performance...
Fengguang Song, Jack Dongarra
ICDCS
2011
IEEE
12 years 5 months ago
Provisioning a Multi-tiered Data Staging Area for Extreme-Scale Machines
—Massively parallel scientific applications, running on extreme-scale supercomputers, produce hundreds of terabytes of data per run, driving the need for storage solutions to im...
Ramya Prabhakar, Sudharshan S. Vazhkudai, Youngjae...