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CLEIEJ
2007
152views more  CLEIEJ 2007»
13 years 4 months ago
Gene Expression Analysis using Markov Chains extracted from RNNs
Abstract. This paper present a new approach for the analysis of gene expression, by extracting a Markov Chain from trained Recurrent Neural Networks (RNNs). A lot of microarray dat...
Igor Lorenzato Almeida, Denise Regina Pechmann Sim...
BMCBI
2007
127views more  BMCBI 2007»
13 years 4 months ago
A Latent Variable Approach for Meta-Analysis of Gene Expression Data from Multiple Microarray Experiments
Background: With the explosion in data generated using microarray technology by different investigators working on similar experiments, it is of interest to combine results across...
Hyungwon Choi, Ronglai Shen, Arul M. Chinnaiyan, D...
EVOW
2008
Springer
13 years 6 months ago
Detection of Quantitative Trait Associated Genes Using Cluster Analysis
Abstract. Many efforts have been involved in association study of quantitative phenotypes and expressed genes. The key issue is how to efficiently identify phenotype-associated gen...
Zhenyu Jia, Sha Tang, Dan Mercola, Shizhong Xu
ICCAD
2008
IEEE
153views Hardware» more  ICCAD 2008»
14 years 1 months ago
SPM management using Markov chain based data access prediction
— Leveraging the power of scratchpad memories (SPMs) available in most embedded systems today is crucial to extract maximum performance from application programs. While regular a...
Taylan Yemliha, Shekhar Srikantaiah, Mahmut T. Kan...
BMCBI
2006
181views more  BMCBI 2006»
13 years 4 months ago
Array2BIO: from microarray expression data to functional annotation of co-regulated genes
Background: There are several isolated tools for partial analysis of microarray expression data. To provide an integrative, easy-to-use and automated toolkit for the analysis of A...
Gabriela G. Loots, Patrick S. G. Chain, Shalini Ma...