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» Gene Ontology annotations at SGD: new data sources and annot...
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BMCBI
2007
131views more  BMCBI 2007»
13 years 4 months ago
FUNC: a package for detecting significant associations between gene sets and ontological annotations
Background: Genome-wide expression, sequence and association studies typically yield large sets of gene candidates, which must then be further analysed and interpreted. Informatio...
Kay Prüfer, Bjoern Muetzel, Hong Hai Do, Gunt...
BMCBI
2007
129views more  BMCBI 2007»
13 years 4 months ago
Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach
Background: Incorrectly annotated sequence data are becoming more commonplace as databases increasingly rely on automated techniques for annotation. Hence, there is an urgent need...
Carson M. Andorf, Drena Dobbs, Vasant Honavar
DILS
2005
Springer
13 years 10 months ago
Hybrid Integration of Molecular-Biological Annotation Data
: We present a new approach to integrate annotation data from public sources for the expression analysis of genes and proteins. Expression data is materialized in a data warehouse ...
Toralf Kirsten, Hong Hai Do, Christine Körner...
BMCBI
2004
144views more  BMCBI 2004»
13 years 4 months ago
GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes
Background: The function of a novel gene product is typically predicted by transitive assignment of annotation from similar sequences. We describe a novel method, GOtcha, for pred...
David M. A. Martin, Matthew Berriman, Geoffrey J. ...
IJSWIS
2007
96views more  IJSWIS 2007»
13 years 4 months ago
An Incremental Method for the Lexical Annotation of Domain Ontologies
In this paper, we present MELIS (Meaning Elicitation and Lexical Integration System), a method and a software tool for enabling an incremental process of automatic annotation of lo...
Sonia Bergamaschi, Paolo Bouquet, Daniel Giacomuzz...