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» Gene ontology annotation as text categorization: An empirica...
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BMCBI
2006
165views more  BMCBI 2006»
13 years 5 months ago
Validation and functional annotation of expression-based clusters based on gene ontology
Background: The biological interpretation of large-scale gene expression data is one of the paramount challenges in current bioinformatics. In particular, placing the results in t...
Ralf Steuer, Peter Humburg, Joachim Selbig
BMCBI
2007
168views more  BMCBI 2007»
13 years 5 months ago
Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks
Background: Uncovering cellular roles of a protein is a task of tremendous importance and complexity that requires dedicated experimental work as well as often sophisticated data ...
Nikolai Daraselia, Anton Yuryev, Sergei Egorov, Il...
BMCBI
2008
119views more  BMCBI 2008»
13 years 5 months ago
Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction
Background: This paper describes and evaluates a sentence selection engine that extracts a GeneRiF (Gene Reference into Functions) as defined in ENTREZ-Gene based on a MEDLINE rec...
Julien Gobeill, Imad Tbahriti, Frédé...
KDD
2009
ACM
249views Data Mining» more  KDD 2009»
14 years 5 months ago
Drosophila gene expression pattern annotation using sparse features and term-term interactions
The Drosophila gene expression pattern images document the spatial and temporal dynamics of gene expression and they are valuable tools for explicating the gene functions, interac...
Shuiwang Ji, Lei Yuan, Ying-Xin Li, Zhi-Hua Zhou, ...
WWW
2004
ACM
14 years 5 months ago
Meteor-s web service annotation framework
The World Wide Web is emerging not only as an infrastructure for data, but also for a broader variety of resources that are increasingly being made available as Web services. Rele...
Abhijit A. Patil, Swapna A. Oundhakar, Amit P. She...