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ICTAI
2008
IEEE
13 years 11 months ago
Haplotype Inference with Boolean Constraint Solving: An Overview
Boolean satisfiability (SAT) finds a wide range of practical applications, including Artificial Intelligence and, more recently, Bioinformatics. Although encoding some combinat...
Inês Lynce, Ana Graça, João Ma...
CONSTRAINTS
2008
78views more  CONSTRAINTS 2008»
13 years 5 months ago
Boosting Haplotype Inference with Local Search
Abstract. A very challenging problem in the genetics domain is to infer haplotypes from genotypes. This process is expected to identify genes affecting health, disease and response...
Inês Lynce, João Marques-Silva, Steve...
AB
2007
Springer
13 years 9 months ago
Efficient Haplotype Inference with Pseudo-boolean Optimization
Abstract. Haplotype inference from genotype data is a key computational problem in bioinformatics, since retrieving directly haplotype information from DNA samples is not feasible ...
Ana Graça, João Marques-Silva, In&ec...
EXPCS
2007
13 years 8 months ago
Performance testing of combinatorial solvers with isomorph class instances
Combinatorial optimization problems expressed as Boolean constraint satisfaction problems (BCSPs) arise in several contexts, ranging from the classical unate set-packing problems ...
Franc Brglez, Jason A. Osborne
CPAIOR
2010
Springer
13 years 2 months ago
Lazy Clause Generation: Combining the Power of SAT and CP (and MIP?) Solving
Finite domain propagation solving, the basis of constraint programming (CP) solvers, allows building very high-level models of problems, and using highly specific inference encapsu...
Peter J. Stuckey