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» Haplotyping with missing data via perfect path phylogenies
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IWPEC
2004
Springer
13 years 10 months ago
Perfect Path Phylogeny Haplotyping with Missing Data Is Fixed-Parameter Tractable
Abstract. Haplotyping via perfect phylogeny is a method for retrieving haplotypes from genotypes. Fast algorithms are known for computing perfect phylogenies from complete and erro...
Jens Gramm, Till Nierhoff, Till Tantau
DAM
2007
131views more  DAM 2007»
13 years 4 months ago
Haplotyping with missing data via perfect path phylogenies
Computational methods for inferring haplotype information from genotype data are used in studying the association between genomic variation and medical condition. Recently, Gusfi...
Jens Gramm, Till Nierhoff, Roded Sharan, Till Tant...
RECOMB
2004
Springer
14 years 5 months ago
Perfect phylogeny and haplotype assignment
This paper is concerned with the reconstruction of perfect phylogenies from binary character data with missing values, and related problems of inferring complete haplotypes from h...
Eran Halperin, Richard M. Karp
TCBB
2008
101views more  TCBB 2008»
13 years 4 months ago
The Undirected Incomplete Perfect Phylogeny Problem
The incomplete perfect phylogeny (IPP) problem and the incomplete perfect phylogeny haplotyping (IPPH) problem deal with constructing a phylogeny for a given set of haplotypes or g...
Ravi Vijaya Satya, Amar Mukherjee
RECOMB
2003
Springer
14 years 5 months ago
Large scale reconstruction of haplotypes from genotype data
Critical to the understanding of the genetic basis for complex diseases is the modeling of human variation. Most of this variation can be characterized by single nucleotide polymo...
Eleazar Eskin, Eran Halperin, Richard M. Karp