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ISCA
2010
IEEE
236views Hardware» more  ISCA 2010»
13 years 10 months ago
Elastic cooperative caching: an autonomous dynamically adaptive memory hierarchy for chip multiprocessors
Next generation tiled microarchitectures are going to be limited by off-chip misses and by on-chip network usage. Furthermore, these platforms will run an heterogeneous mix of ap...
Enric Herrero, José González, Ramon ...
IEEEINTERACT
2003
IEEE
13 years 10 months ago
A Region-Based Compilation Infrastructure
: The traditional framework for back-end compilation is based on the scope of functions, which is a natural boundary to partition an entire program for compilation. However, the si...
Yang Liu, Zhaoqing Zhang, Ruliang Qiao, Roy Dz-Chi...
BMCBI
2007
233views more  BMCBI 2007»
13 years 5 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
ICCAD
2003
IEEE
141views Hardware» more  ICCAD 2003»
13 years 10 months ago
An Enhanced Multilevel Algorithm for Circuit Placement
This paper presents several important enhancements to the recently published multilevel placement package mPL [12]. The improvements include (i) unconstrained quadratic relaxation...
Tony F. Chan, Jason Cong, Tim Kong, Joseph R. Shin...
BMCBI
2011
12 years 8 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes