55 search results - page 2 / 11 » Hardware-Accelerated RNA Secondary-Structure Alignment |
BMCBI
2002
13 years 5 months ago
2002
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
RECOMB
2005
Springer
14 years 5 months ago
2005
Springer
As one of the earliest problems in computational biology, RNA secondary structure prediction (sometimes referred to as "RNA folding") problem has attracted attention agai...
BMCBI
2011
13 years 9 days ago
2011
Background: With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these mol...
BIOSURVEILLANCE
2007
Springer
13 years 11 months ago
2007
Springer
Abstract. Conserved regions, or motifs, present among RNA secondary structures serve as a useful indicator for predicting the functionality of the RNA molecules. Automated detectio...
BMCBI
2006
13 years 5 months ago
2006
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...