34 search results - page 1 / 7 » Improved benchmarks for computational motif discovery |
BMCBI
2007
13 years 4 months ago
2007
Background: An important step in annotation of sequenced genomes is the identification of transcription factor binding sites. More than a hundred different computational methods h...
SAC
2004
ACM
13 years 10 months ago
2004
ACM
In this paper, we demonstrate that the performance of a motif discovery algorithm can be significantly improved by embedding it into a novel framework that effectively guides the ...
BMCBI
2006
13 years 4 months ago
2006
Background: Understanding gene regulatory networks has become one of the central research problems in bioinformatics. More than thirty algorithms have been proposed to identify DN...
BMCBI
2010
13 years 4 months ago
2010
Background: Protein sorting is the process that newly synthesized proteins are transported to their target locations within or outside of the cell. This process is precisely regul...
NAR
2007
13 years 4 months ago
2007
Short, linear motifs (SLiMs) play a critical role in many biological processes, particularly in protein–protein interactions. Overrepresentation of convergent occurrences of mot...